Universal Informatics · Research reading room

Watching gene expression in color.

Simpson JH. · eLife · 2019 · Journal publication

Original publication · Original publication · Original publication

Recorded summary

Reference associated with Tryptophan Autofluorescence as a Primary Optical Marker of Gene Transcription.

Recorded limitations

Bibliographic metadata matched; scientific claims await appraisal.

Evidence and provenance

Chapter Trust Factor uses a minimum of three distinct qualifying studies. Publication records retain their own evidence and assessment.

Study design and assessment
design
Journal publication
assessment
Not recorded
trust Factor
scope
Paper
status
unassessed
score
Not recorded
basis
Bibliographic identity checks do not establish study design, blinding or evidential strength.
jadad
status
unassessed
score
Not recorded
evidence
Not recorded
Topics and recorded topic scores
  1. key
    general:autofluorescence-sensing
    title
    Autofluorescence and Molecular Sensing
    collection
    general
    trust Score
    Not recorded
Citation snapshot and identifiers
id
hsi-0d33d222d235dd
doi
10.7554/elife.49414
pmid
31348001
citation Snapshot
Not recorded
citations By Collection
general
Not recorded
Complete approved library record
id
hsi-0d33d222d235dd
aliases
None recorded
source References
  1. ref
    NPL-193
    record Id
    hsi-0d33d222d235dd
    source Type
    Journal publication
    title
    Watching gene expression in color.
    authors
    Simpson JH.
    year
    2019
    journal
    eLife
    doi
    10.7554/elife.49414
    pmid
    31348001
    pmcid
    PMC6660214
    patent Number
    Not recorded
    original Assignee
    Not recorded
    original Citation
    Simpson CL (2019). "Transcriptional Reporters: Watching Gene Expression in Color." eLife 8:e49414 (PMC 6660214) — Insight on TransTimer dual-colour fluorescent transcriptional reporter; green-to-red colour shift encoding transcriptional history at single-cell resolution; protein translation as the mechanism linking gene transcription to visible fluorescence
    original Section
    Tryptophan Autofluorescence as a Primary Optical Marker of Gene Transcription
    metadata Status
    metadata-reconciled
    claim Review
    Not independently appraised
    source URL
    https://www.notion.so/3807b9c99c5680599be7d8337c817b15
    publication URL
    https://pubmed.ncbi.nlm.nih.gov/31348001/
    metadata URL
    https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=DOI%3A%2210.7554%2FeLife.49414%22&format=json&resultType=core&pageSize=4
    corrections

    Canonical title, authors, year and identifiers follow the linked public metadata record. The original citation is retained for comparison. · Published title reconciled with the metadata record.

    topic Id
    autofluorescence-sensing
    role
    Focused chapter source
  2. ref
    NPL-198
    record Id
    hsi-0d33d222d235dd
    source Type
    Journal publication
    title
    Watching gene expression in color.
    authors
    Simpson JH.
    year
    2019
    journal
    eLife
    doi
    10.7554/elife.49414
    pmid
    31348001
    pmcid
    PMC6660214
    patent Number
    Not recorded
    original Assignee
    Not recorded
    original Citation
    Simpson CL (2019). "Watching Gene Expression in Color: TransTimer Dual-Colour Fluorescent Reporter." eLife 8:e49414 — TransTimer reporter system: slow-maturing green fluorescent protein and fast-maturing red fluorescent protein under same promoter; green/red ratio encodes time since transcriptional activation; real-time colour-coded visualisation of transcriptional history in living cells
    original Section
    Tryptophan Autofluorescence as a Primary Optical Marker of Gene Transcription
    metadata Status
    metadata-reconciled
    claim Review
    Not independently appraised
    source URL
    https://www.notion.so/3807b9c99c5680599be7d8337c817b15
    publication URL
    https://pubmed.ncbi.nlm.nih.gov/31348001/
    metadata URL
    https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=DOI%3A%2210.7554%2FeLife.49414%22&format=json&resultType=core&pageSize=4
    corrections

    Canonical title, authors, year and identifiers follow the linked public metadata record. The original citation is retained for comparison. · Published title reconciled with the metadata record.

    topic Id
    autofluorescence-sensing
    role
    Focused chapter source
source Type
Journal publication
source Verification
Bibliographic metadata matched; scientific claims await appraisal.
source Collection
Hyperspectral Imaging · patent section 2.4
title
Watching gene expression in color.
journal
eLife
neurotransmitters
None recorded
year
2019
authors
Simpson JH.
design
Journal publication
kind
Journal publication
identity Conflict
Not recorded
doi
10.7554/elife.49414
pmid
31348001
urls

https://pubmed.ncbi.nlm.nih.gov/31348001/ · https://doi.org/10.7554/elife.49414 · https://pmc.ncbi.nlm.nih.gov/articles/PMC6660214/

collections

general

categories

Hyperspectral Imaging

targets
None recorded
priority
1
quotes
None recorded
summary
Reference associated with Tryptophan Autofluorescence as a Primary Optical Marker of Gene Transcription.
limitation
Bibliographic metadata matched; scientific claims await appraisal.
citation Count
Not recorded
paper Trust Assessment
scope
Paper
status
unassessed
score
Not recorded
basis
Bibliographic identity checks do not establish study design, blinding or evidential strength.
citations By Collection
general
Not recorded
topics
  1. key
    general:autofluorescence-sensing
    title
    Autofluorescence and Molecular Sensing
    collection
    general
    trust Score
    Not recorded
journal Key
elife
journal Label
eLife
chapter Entries
  1. id
    general-autofluorescence-sensing-hsi-0d33d222d235dd
    record Id
    hsi-0d33d222d235dd
    title
    Watching gene expression in color.
    journal
    eLife
    year
    2019
    authors
    Simpson JH.
    design
    Journal publication
    urls

    https://pubmed.ncbi.nlm.nih.gov/31348001/ · https://doi.org/10.7554/elife.49414 · https://pmc.ncbi.nlm.nih.gov/articles/PMC6660214/

    quotes
    None recorded
    summary
    Reference associated with Tryptophan Autofluorescence as a Primary Optical Marker of Gene Transcription.
    related Versions
    None recorded
    limitation
    Bibliographic metadata matched; scientific claims await appraisal.
    citation Count
    Not recorded
    source Pages
    None recorded
    doi
    10.7554/elife.49414
    pmid
    31348001
    targets
    None recorded
    categories

    Hyperspectral Imaging

    source References
    1. ref
      NPL-193
      record Id
      hsi-0d33d222d235dd
      source Type
      Journal publication
      title
      Watching gene expression in color.
      authors
      Simpson JH.
      year
      2019
      journal
      eLife
      doi
      10.7554/elife.49414
      pmid
      31348001
      pmcid
      PMC6660214
      patent Number
      Not recorded
      original Assignee
      Not recorded
      original Citation
      Simpson CL (2019). "Transcriptional Reporters: Watching Gene Expression in Color." eLife 8:e49414 (PMC 6660214) — Insight on TransTimer dual-colour fluorescent transcriptional reporter; green-to-red colour shift encoding transcriptional history at single-cell resolution; protein translation as the mechanism linking gene transcription to visible fluorescence
      original Section
      Tryptophan Autofluorescence as a Primary Optical Marker of Gene Transcription
      metadata Status
      metadata-reconciled
      claim Review
      Not independently appraised
      source URL
      https://www.notion.so/3807b9c99c5680599be7d8337c817b15
      publication URL
      https://pubmed.ncbi.nlm.nih.gov/31348001/
      metadata URL
      https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=DOI%3A%2210.7554%2FeLife.49414%22&format=json&resultType=core&pageSize=4
      corrections

      Canonical title, authors, year and identifiers follow the linked public metadata record. The original citation is retained for comparison. · Published title reconciled with the metadata record.

      topic Id
      autofluorescence-sensing
      role
      Focused chapter source
    2. ref
      NPL-198
      record Id
      hsi-0d33d222d235dd
      source Type
      Journal publication
      title
      Watching gene expression in color.
      authors
      Simpson JH.
      year
      2019
      journal
      eLife
      doi
      10.7554/elife.49414
      pmid
      31348001
      pmcid
      PMC6660214
      patent Number
      Not recorded
      original Assignee
      Not recorded
      original Citation
      Simpson CL (2019). "Watching Gene Expression in Color: TransTimer Dual-Colour Fluorescent Reporter." eLife 8:e49414 — TransTimer reporter system: slow-maturing green fluorescent protein and fast-maturing red fluorescent protein under same promoter; green/red ratio encodes time since transcriptional activation; real-time colour-coded visualisation of transcriptional history in living cells
      original Section
      Tryptophan Autofluorescence as a Primary Optical Marker of Gene Transcription
      metadata Status
      metadata-reconciled
      claim Review
      Not independently appraised
      source URL
      https://www.notion.so/3807b9c99c5680599be7d8337c817b15
      publication URL
      https://pubmed.ncbi.nlm.nih.gov/31348001/
      metadata URL
      https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=DOI%3A%2210.7554%2FeLife.49414%22&format=json&resultType=core&pageSize=4
      corrections

      Canonical title, authors, year and identifiers follow the linked public metadata record. The original citation is retained for comparison. · Published title reconciled with the metadata record.

      topic Id
      autofluorescence-sensing
      role
      Focused chapter source
    source Type
    Journal publication
    source Verification
    Bibliographic metadata matched; scientific claims await appraisal.
    collection
    general
    chapter Number
    11
    topic Id
    autofluorescence-sensing
    topic Title
    Autofluorescence and Molecular Sensing
    trust Score
    Not recorded
    paper Trust Assessment
    scope
    Paper
    status
    unassessed
    score
    Not recorded
    basis
    Bibliographic identity checks do not establish study design, blinding or evidential strength.
jadad
status
unassessed
score
Not recorded
condition Evidence
None recorded
conditions
None recorded
topic Trust Scores
None recorded
full Text
status
not-indexed
retrieval Available
false

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