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The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression.

Almassalha LM, Tiwari A, Ruhoff PT, Stypula-Cyrus Y, Cherkezyan L, Matsuda H, Dela Cruz MA, Chandler JE, White C, Maneval C, Subramanian H, Szleifer I, Roy HK, Backman V. · Scientific reports · 2017 · Journal publication

Original publication · Original publication · Original publication

Recorded summary

Reference associated with Fractal TFBS Analysis.

Recorded limitations

Bibliographic metadata matched; scientific claims await appraisal.

Evidence and provenance

Chapter Trust Factor uses a minimum of three distinct qualifying studies. Publication records retain their own evidence and assessment.

Study design and assessment
design
Journal publication
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Not recorded
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Paper
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Not recorded
basis
Bibliographic identity checks do not establish study design, blinding or evidential strength.
jadad
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evidence
Not recorded
Topics and recorded topic scores
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Citation snapshot and identifiers
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hsi-ca225cf85be823
doi
10.1038/srep41061
pmid
28117353
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source References
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    The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression.
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    Almassalha LM, Tiwari A, Ruhoff PT, Stypula-Cyrus Y, Cherkezyan L, Matsuda H, Dela Cruz MA, Chandler JE, White C, Maneval C, Subramanian H, Szleifer I, Roy HK, Backman V.
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    Scientific reports
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    original Citation
    Almassalha LM, Silverstein SD, Bauer GM et al. (2017). "The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression." Scientific Reports 7:41061. DOI: 10.1038/srep41061
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    Fractal TFBS Analysis
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    The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression.
    authors
    Almassalha LM, Tiwari A, Ruhoff PT, Stypula-Cyrus Y, Cherkezyan L, Matsuda H, Dela Cruz MA, Chandler JE, White C, Maneval C, Subramanian H, Szleifer I, Roy HK, Backman V.
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    2017
    journal
    Scientific reports
    doi
    10.1038/srep41061
    pmid
    28117353
    pmcid
    PMC5259786
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    Not recorded
    original Assignee
    Not recorded
    original Citation
    Almassalha LM, Silverstein SD, Bauer GM et al. (2017). "The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression." Scientific Reports 7:41061. DOI: 10.1038/srep41061
    original Section
    Fractal TFBS Analysis
    metadata Status
    metadata-matched
    claim Review
    Not independently appraised
    source URL
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    None recorded
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    Focused chapter source
source Type
Journal publication
source Verification
Bibliographic metadata matched; scientific claims await appraisal.
source Collection
Hyperspectral Imaging · patent section 2.4
title
The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression.
journal
Scientific reports
neurotransmitters
None recorded
year
2017
authors
Almassalha LM, Tiwari A, Ruhoff PT, Stypula-Cyrus Y, Cherkezyan L, Matsuda H, Dela Cruz MA, Chandler JE, White C, Maneval C, Subramanian H, Szleifer I, Roy HK, Backman V.
design
Journal publication
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Journal publication
identity Conflict
Not recorded
doi
10.1038/srep41061
pmid
28117353
urls

https://pubmed.ncbi.nlm.nih.gov/28117353/ · https://doi.org/10.1038/srep41061 · https://pmc.ncbi.nlm.nih.gov/articles/PMC5259786/

collections

general

categories

Hyperspectral Imaging

targets
None recorded
priority
1
quotes
None recorded
summary
Reference associated with Fractal TFBS Analysis.
limitation
Bibliographic metadata matched; scientific claims await appraisal.
citation Count
Not recorded
paper Trust Assessment
scope
Paper
status
unassessed
score
Not recorded
basis
Bibliographic identity checks do not establish study design, blinding or evidential strength.
citations By Collection
general
Not recorded
topics
  1. key
    general:imaging-transcriptomics
    title
    Imaging, Transcriptomics and Gene Regulation
    collection
    general
    trust Score
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journal Key
scientificreports
journal Label
Scientific reports
chapter Entries
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    title
    The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression.
    journal
    Scientific reports
    year
    2017
    authors
    Almassalha LM, Tiwari A, Ruhoff PT, Stypula-Cyrus Y, Cherkezyan L, Matsuda H, Dela Cruz MA, Chandler JE, White C, Maneval C, Subramanian H, Szleifer I, Roy HK, Backman V.
    design
    Journal publication
    urls

    https://pubmed.ncbi.nlm.nih.gov/28117353/ · https://doi.org/10.1038/srep41061 · https://pmc.ncbi.nlm.nih.gov/articles/PMC5259786/

    quotes
    None recorded
    summary
    Reference associated with Fractal TFBS Analysis.
    related Versions
    None recorded
    limitation
    Bibliographic metadata matched; scientific claims await appraisal.
    citation Count
    Not recorded
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    doi
    10.1038/srep41061
    pmid
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    targets
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    categories

    Hyperspectral Imaging

    source References
    1. ref
      NPL-201
      record Id
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      title
      The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression.
      authors
      Almassalha LM, Tiwari A, Ruhoff PT, Stypula-Cyrus Y, Cherkezyan L, Matsuda H, Dela Cruz MA, Chandler JE, White C, Maneval C, Subramanian H, Szleifer I, Roy HK, Backman V.
      year
      2017
      journal
      Scientific reports
      doi
      10.1038/srep41061
      pmid
      28117353
      pmcid
      PMC5259786
      patent Number
      Not recorded
      original Assignee
      Not recorded
      original Citation
      Almassalha LM, Silverstein SD, Bauer GM et al. (2017). "The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression." Scientific Reports 7:41061. DOI: 10.1038/srep41061
      original Section
      Fractal TFBS Analysis
      metadata Status
      metadata-matched
      claim Review
      Not independently appraised
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      https://www.notion.so/3807b9c99c5680599be7d8337c817b15
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      https://pubmed.ncbi.nlm.nih.gov/28117353/
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    2. ref
      NPL-209
      record Id
      hsi-ca225cf85be823
      source Type
      Journal publication
      title
      The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression.
      authors
      Almassalha LM, Tiwari A, Ruhoff PT, Stypula-Cyrus Y, Cherkezyan L, Matsuda H, Dela Cruz MA, Chandler JE, White C, Maneval C, Subramanian H, Szleifer I, Roy HK, Backman V.
      year
      2017
      journal
      Scientific reports
      doi
      10.1038/srep41061
      pmid
      28117353
      pmcid
      PMC5259786
      patent Number
      Not recorded
      original Assignee
      Not recorded
      original Citation
      Almassalha LM, Silverstein SD, Bauer GM et al. (2017). "The Global Relationship between Chromatin Physical Topology, Fractal Structure, and Gene Expression." Scientific Reports 7:41061. DOI: 10.1038/srep41061
      original Section
      Fractal TFBS Analysis
      metadata Status
      metadata-matched
      claim Review
      Not independently appraised
      source URL
      https://www.notion.so/3807b9c99c5680599be7d8337c817b15
      publication URL
      https://pubmed.ncbi.nlm.nih.gov/28117353/
      metadata URL
      https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=DOI%3A%2210.1038%2Fsrep41061%22&format=json&resultType=core&pageSize=4
      corrections
      None recorded
      topic Id
      imaging-transcriptomics
      role
      Focused chapter source
    source Type
    Journal publication
    source Verification
    Bibliographic metadata matched; scientific claims await appraisal.
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    general
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    Imaging, Transcriptomics and Gene Regulation
    trust Score
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    paper Trust Assessment
    scope
    Paper
    status
    unassessed
    score
    Not recorded
    basis
    Bibliographic identity checks do not establish study design, blinding or evidential strength.
jadad
status
unassessed
score
Not recorded
condition Evidence
None recorded
conditions
None recorded
topic Trust Scores
None recorded
full Text
status
not-indexed
retrieval Available
false

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