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Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks.

Pettie KP, Dresch JM, Drewell RA. · Mechanisms of development · 2016 · Journal publication

Original publication · Original publication · Original publication

Recorded summary

Reference associated with Fractal TFBS Analysis / Fractal Chromatin 3D Organisation.

Recorded limitations

Bibliographic metadata matched; scientific claims await appraisal.

Evidence and provenance

Chapter Trust Factor uses a minimum of three distinct qualifying studies. Publication records retain their own evidence and assessment.

Study design and assessment
design
Journal publication
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Not recorded
trust Factor
scope
Paper
status
unassessed
score
Not recorded
basis
Bibliographic identity checks do not establish study design, blinding or evidential strength.
jadad
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unassessed
score
Not recorded
evidence
Not recorded
Topics and recorded topic scores
  1. key
    general:imaging-transcriptomics
    title
    Imaging, Transcriptomics and Gene Regulation
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Citation snapshot and identifiers
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hsi-d4f9970183960d
doi
10.1016/j.mod.2016.06.001
pmid
27264535
citation Snapshot
Not recorded
citations By Collection
general
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Complete approved library record
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hsi-d4f9970183960d
aliases
None recorded
source References
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    NPL-216
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    hsi-d4f9970183960d
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    Journal publication
    title
    Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks.
    authors
    Pettie KP, Dresch JM, Drewell RA.
    year
    2016
    journal
    Mechanisms of development
    doi
    10.1016/j.mod.2016.06.001
    pmid
    27264535
    pmcid
    PMC5441388
    patent Number
    Not recorded
    original Assignee
    Not recorded
    original Citation
    Pettie KP, Dresch JM, Drewell RA (2016). "Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks." Mechanisms of Development 141:51–61. PMC5441388 — TFBS broadly distributed across ChIP peaks rather than narrowly centred; multiple sites per peak; establishes that TFBS positional distribution within regulatory regions carries functional significance
    original Section
    Fractal TFBS Analysis / Fractal Chromatin 3D Organisation
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    claim Review
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    Focused chapter source
source Type
Journal publication
source Verification
Bibliographic metadata matched; scientific claims await appraisal.
source Collection
Hyperspectral Imaging · patent section 2.4
title
Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks.
journal
Mechanisms of development
neurotransmitters
None recorded
year
2016
authors
Pettie KP, Dresch JM, Drewell RA.
design
Journal publication
kind
Journal publication
identity Conflict
Not recorded
doi
10.1016/j.mod.2016.06.001
pmid
27264535
urls

https://pubmed.ncbi.nlm.nih.gov/27264535/ · https://doi.org/10.1016/j.mod.2016.06.001 · https://pmc.ncbi.nlm.nih.gov/articles/PMC5441388/

collections

general

categories

Hyperspectral Imaging

targets
None recorded
priority
1
quotes
None recorded
summary
Reference associated with Fractal TFBS Analysis / Fractal Chromatin 3D Organisation.
limitation
Bibliographic metadata matched; scientific claims await appraisal.
citation Count
Not recorded
paper Trust Assessment
scope
Paper
status
unassessed
score
Not recorded
basis
Bibliographic identity checks do not establish study design, blinding or evidential strength.
citations By Collection
general
Not recorded
topics
  1. key
    general:imaging-transcriptomics
    title
    Imaging, Transcriptomics and Gene Regulation
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    general
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Mechanisms of development
chapter Entries
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    title
    Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks.
    journal
    Mechanisms of development
    year
    2016
    authors
    Pettie KP, Dresch JM, Drewell RA.
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    Journal publication
    urls

    https://pubmed.ncbi.nlm.nih.gov/27264535/ · https://doi.org/10.1016/j.mod.2016.06.001 · https://pmc.ncbi.nlm.nih.gov/articles/PMC5441388/

    quotes
    None recorded
    summary
    Reference associated with Fractal TFBS Analysis / Fractal Chromatin 3D Organisation.
    related Versions
    None recorded
    limitation
    Bibliographic metadata matched; scientific claims await appraisal.
    citation Count
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    source Pages
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    doi
    10.1016/j.mod.2016.06.001
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    Hyperspectral Imaging

    source References
    1. ref
      NPL-216
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      hsi-d4f9970183960d
      source Type
      Journal publication
      title
      Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks.
      authors
      Pettie KP, Dresch JM, Drewell RA.
      year
      2016
      journal
      Mechanisms of development
      doi
      10.1016/j.mod.2016.06.001
      pmid
      27264535
      pmcid
      PMC5441388
      patent Number
      Not recorded
      original Assignee
      Not recorded
      original Citation
      Pettie KP, Dresch JM, Drewell RA (2016). "Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks." Mechanisms of Development 141:51–61. PMC5441388 — TFBS broadly distributed across ChIP peaks rather than narrowly centred; multiple sites per peak; establishes that TFBS positional distribution within regulatory regions carries functional significance
      original Section
      Fractal TFBS Analysis / Fractal Chromatin 3D Organisation
      metadata Status
      metadata-matched
      claim Review
      Not independently appraised
      source URL
      https://www.notion.so/3807b9c99c5680599be7d8337c817b15
      publication URL
      https://pubmed.ncbi.nlm.nih.gov/27264535/
      metadata URL
      https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID%3APMC5441388&format=json&resultType=core&pageSize=4
      corrections
      None recorded
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      imaging-transcriptomics
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      Focused chapter source
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    Journal publication
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    Bibliographic metadata matched; scientific claims await appraisal.
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    trust Score
    Not recorded
    paper Trust Assessment
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    Paper
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    unassessed
    score
    Not recorded
    basis
    Bibliographic identity checks do not establish study design, blinding or evidential strength.
jadad
status
unassessed
score
Not recorded
condition Evidence
None recorded
conditions
None recorded
topic Trust Scores
None recorded
full Text
status
not-indexed
retrieval Available
false

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