Universal Informatics · Research reading room

Finding low-energy conformations of lattice protein models by quantum annealing

Perdomo-Ortiz A, Dickson N, Drew-Brook M, Rose G, Aspuru-Guzik A. · Scientific Reports · 2012

Original publication · Original publication · Original publication

Attributed extracts from the research record

“Lattice protein folding models are a cornerstone of computational biophysics.
This first implementation of a biophysical problem paves the way towards studying optimization problems in biophysics and statistical mechanics using quantum devices.”

Evidence and provenance

Chapter Trust Factor uses a minimum of three distinct qualifying studies. Publication records retain their own evidence and assessment.

Study design and assessment
design
assessment
Not recorded
trust Factor
score
1
scope
Paper
status
assessed
randomized Controlled Trial
Not recorded
blinding
not-confirmed
peer Reviewed
true
basis
Indexed peer-reviewed research; a qualifying randomized controlled design is not established in the reviewed record.
sources

https://pubmed.ncbi.nlm.nih.gov/22891157/ · https://doi.org/10.1038/srep00571 · https://www.nature.com/articles/srep00571

review Scope
Existing publication-specific assessments and bibliographic indexing; no blanket full-text appraisal.
assessed At
2026-10-27
jadad
status
unassessed
score
Not recorded
evidence
Not recorded
Topics and recorded topic scores
  1. key
    general:sound-xxviii
    title
    Quantum computing methods for bioinformatics and gene-expression modelling
    collection
    general
    trust Score
    Not recorded
Citation snapshot and identifiers
id
pmid-22891157
doi
10.1038/srep00571
pmid
22891157
citation Snapshot
Not recorded
citations By Collection
general
234
Complete approved library record
id
pmid-22891157
publication Key
Not recorded
aliases
None recorded
title
Finding low-energy conformations of lattice protein models by quantum annealing
journal
Scientific Reports
publisher Family
nature
publisher Family Label
Nature Portfolio
neurotransmitters
None recorded
year
2012
authors
Perdomo-Ortiz A, Dickson N, Drew-Brook M, Rose G, Aspuru-Guzik A.
design
kind
Journal article
identity Conflict
Not recorded
doi
10.1038/srep00571
pmid
22891157
urls

https://doi.org/10.1038/srep00571 · https://www.nature.com/articles/srep00571 · https://pubmed.ncbi.nlm.nih.gov/22891157/

collections

general

categories

Methods & context

targets
None recorded
priority
1
quotes

“Lattice protein folding models are a cornerstone of computational biophysics. · This first implementation of a biophysical problem paves the way towards studying optimization problems in biophysics and statistical mechanics using quantum devices.”

summary
limitation
citation Count
234
paper Trust Assessment
score
1
scope
Paper
status
assessed
randomized Controlled Trial
Not recorded
blinding
not-confirmed
peer Reviewed
true
basis
Indexed peer-reviewed research; a qualifying randomized controlled design is not established in the reviewed record.
sources

https://pubmed.ncbi.nlm.nih.gov/22891157/ · https://doi.org/10.1038/srep00571 · https://www.nature.com/articles/srep00571

review Scope
Existing publication-specific assessments and bibliographic indexing; no blanket full-text appraisal.
assessed At
2026-10-27
citations By Collection
general
234
topics
  1. key
    general:sound-xxviii
    title
    Quantum computing methods for bioinformatics and gene-expression modelling
    collection
    general
    trust Score
    Not recorded
journal Key
scientificreports
journal Label
Scientific Reports
chapter Entries
  1. id
    general-sound-xxviii-pmid-22891157
    record Id
    pmid-22891157
    title
    Finding low-energy conformations of lattice protein models by quantum annealing
    journal
    Scientific Reports
    year
    2012
    authors
    Perdomo-Ortiz A, Dickson N, Drew-Brook M, Rose G, Aspuru-Guzik A.
    design
    urls

    https://doi.org/10.1038/srep00571 · https://www.nature.com/articles/srep00571 · https://pubmed.ncbi.nlm.nih.gov/22891157/

    quotes
      1. text
        “Lattice protein folding models are a cornerstone of computational biophysics.
        emphasis
        false
      1. text
        This first implementation of a biophysical problem paves the way towards studying optimization problems in biophysics and statistical mechanics using quantum devices.”
        emphasis
        false
    citation Count
    234
    source Pages

    114

    targets
    None recorded
    categories

    Methods & context

    doi
    10.1038/srep00571
    pmid
    22891157
    paper Trust Assessment
    score
    1
    scope
    Paper
    status
    assessed
    randomized Controlled Trial
    Not recorded
    blinding
    not-confirmed
    peer Reviewed
    true
    basis
    Indexed peer-reviewed research; a qualifying randomized controlled design is not established in the reviewed record.
    sources

    https://pubmed.ncbi.nlm.nih.gov/22891157/ · https://doi.org/10.1038/srep00571 · https://www.nature.com/articles/srep00571

    review Scope
    Existing publication-specific assessments and bibliographic indexing; no blanket full-text appraisal.
    assessed At
    2026-10-27
    collection
    general
    chapter Number
    7
    topic Id
    sound-xxviii
    topic Title
    Quantum computing methods for bioinformatics and gene-expression modelling
    trust Score
    Not recorded
jadad
status
unassessed
score
Not recorded
condition Evidence
None recorded
conditions
None recorded
topic Trust Scores
None recorded
full Text
status
not-indexed
retrieval Available
false

Open this publication in the interactive library